Detailed information of matrix profile MA1283.1

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Profile summary
Name: TCP14
Matrix ID: MA1283.1
Class: Basic helix-loop-helix factors (bHLH)
Family: TCP domain
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 21241251
Uniprot ID: Q93Z00  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 31 13 40 14 36 5 10 22 2 0 0 2 0 0 19 0 0 0 43 0 ]
C [ 5 16 0 2 2 5 14 2 10 0 0 0 0 0 0 47 47 47 0 47 ]
G [ 5 13 4 18 4 28 18 12 16 47 0 45 47 47 18 0 0 0 4 0 ]
T [ 6 5 3 13 5 9 5 11 19 0 47 0 0 0 10 0 0 0 0 0 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1283.1 MA1283 1 TCP14 Arabidopsis thaliana
TCP domain Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: