Detailed information of matrix profile MA1276.1

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Profile summary
Name: AT3G52440
Matrix ID: MA1276.1
Class: C2H2 zinc finger factors
Family: Dof-type
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 10758479
Uniprot ID: Q9SVC5  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 107 467 348 599 599 599 0 2 169 348 276 ]
C [ 206 4 0 0 0 0 0 6 31 48 131 ]
G [ 187 103 0 0 0 0 599 219 198 136 67 ]
T [ 99 25 251 0 0 0 0 372 201 67 125 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1276.1 MA1276 1 AT3G52440 Arabidopsis thaliana
Dof-type C2H2 zinc finger factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0262.1

ChIP-seq Centrality
log(P-value): -6824.65

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0262.1

ChIP-seq Centrality
log(P-value): -6350.41

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: