Detailed information of matrix profile MA1273.1

  1. Home
  2. Matrix > MA1273.1

Profile summary
Name: dof4.2
Matrix ID: MA1273.1
Class: C2H2 zinc finger factors
Family: Dof-type
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 10758479
Uniprot ID: Q9SUB1  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 288 281 303 236 214 477 580 598 598 598 0 112 89 346 390 353 303 285 265 ]
C [ 70 98 73 75 110 38 0 0 0 0 0 0 253 60 38 66 44 75 94 ]
G [ 106 96 108 145 166 48 0 0 0 0 598 463 28 70 72 50 105 119 120 ]
T [ 134 123 114 142 108 35 18 0 0 0 0 23 228 122 98 129 146 119 119 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1273.1 MA1273 1 dof4.2 Arabidopsis thaliana
Dof-type C2H2 zinc finger factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0324.1

ChIP-seq Centrality
log(P-value): -386.1

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0324.1

ChIP-seq Centrality
log(P-value): -362.472

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: