Detailed information of matrix profile MA1261.1

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Profile summary
Name: AT5G67000
Matrix ID: MA1261.1
Class: AP2/ERF domain
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 9756931
Uniprot ID: Q38Q40  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 34 26 39 40 10 55 0 0 0 0 0 25 41 0 25 ]
C [ 47 20 7 30 35 0 120 0 0 106 3 0 53 10 26 ]
G [ 15 42 57 14 16 80 0 136 138 0 89 106 9 91 67 ]
T [ 42 50 35 54 77 3 18 2 0 32 46 7 35 37 20 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1261.1 MA1261 1 AT5G67000 Arabidopsis thaliana
AP2/ERF domain
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: