Detailed information of matrix profile MA1255.1

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Profile summary
Name: AT1G22810
Matrix ID: MA1255.1
Class: AP2/ERF domain
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 15319480
Uniprot ID: O80542  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 80 118 131 87 102 41 0 122 9 1 10 31 6 129 234 ]
C [ 33 66 222 37 22 180 0 30 532 0 0 128 0 45 164 ]
G [ 417 339 41 347 373 22 596 300 0 595 583 0 576 409 43 ]
T [ 66 73 202 125 99 353 0 144 55 0 3 437 14 13 155 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1255.1 MA1255 1 AT1G22810 Arabidopsis thaliana
AP2/ERF domain
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: