Detailed information of matrix profile MA1249.1

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Profile summary
Name: RAP210
Matrix ID: MA1249.1
Class: AP2/ERF domain
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 15319480
Uniprot ID: Q9SW63  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 169 204 115 11 0 26 0 0 30 0 285 271 226 187 180 ]
C [ 140 67 104 98 0 0 599 0 0 454 34 46 154 82 77 ]
G [ 88 119 156 2 598 10 0 599 569 2 213 205 103 204 195 ]
T [ 202 209 224 488 1 563 0 0 0 143 67 77 116 126 147 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1249.1 MA1249 1 RAP210 Arabidopsis thaliana
AP2/ERF domain
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0379.1

ChIP-seq Centrality
log(P-value): -16854.4

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0379.1

ChIP-seq Centrality
log(P-value): -16803.6

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: