Detailed information of matrix profile MA1247.1

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Profile summary
Name: AT1G28160
Matrix ID: MA1247.1
Class: AP2/ERF domain
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 9756931
Uniprot ID: Q9FZ90  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 129 97 212 8 0 6 0 0 15 200 42 165 182 133 125 ]
C [ 178 38 11 577 0 1 586 0 55 314 15 64 165 42 69 ]
G [ 28 374 366 0 595 586 0 594 511 11 485 301 65 294 296 ]
T [ 260 86 6 10 0 2 9 1 14 70 53 65 183 126 105 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1247.1 MA1247 1 AT1G28160 Arabidopsis thaliana
AP2/ERF domain
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0233.1

ChIP-seq Centrality
log(P-value): -323.213

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0233.1

ChIP-seq Centrality
log(P-value): -304.412

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: