Detailed information of matrix profile MA1237.1

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Profile summary
Name: AT4G16750
Matrix ID: MA1237.1
Class: AP2/ERF domain
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 15319480
Uniprot ID: Q9SUK8  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 122 186 113 102 161 66 30 366 0 0 10 405 0 385 177 ]
C [ 277 97 226 326 63 301 494 0 593 600 0 110 599 14 210 ]
G [ 72 166 91 41 192 47 20 227 4 0 590 1 0 160 79 ]
T [ 129 151 170 131 184 186 56 7 3 0 0 84 1 41 134 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1237.1 MA1237 1 AT4G16750 Arabidopsis thaliana
AP2/ERF domain
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0264.1

ChIP-seq Centrality
log(P-value): -19155.4

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0264.1

ChIP-seq Centrality
log(P-value): -18926.9

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: