Detailed information of matrix profile MA1229.1

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Profile summary
Name: AT2G44940
Matrix ID: MA1229.1
Class: AP2/ERF domain
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 15319480
Uniprot ID: Q8LBQ7  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 176 192 91 25 0 18 0 0 0 0 74 154 178 145 151 ]
C [ 154 55 89 85 0 0 560 0 0 114 19 71 150 63 78 ]
G [ 66 134 184 2 560 14 0 560 560 0 434 287 71 217 164 ]
T [ 164 179 196 448 0 528 0 0 0 446 33 48 161 135 167 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1229.1 MA1229 1 AT2G44940 Arabidopsis thaliana
AP2/ERF domain
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: