Detailed information of matrix profile MA1228.1

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Profile summary
Name: AT4G18450
Matrix ID: MA1228.1
Class: AP2/ERF domain
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 9756931
Uniprot ID: Q8LBQ7  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 145 78 84 120 73 84 121 5 52 19 0 0 11 0 3 170 35 ]
C [ 83 290 299 72 288 337 32 378 472 0 537 537 0 503 534 0 263 ]
G [ 182 68 50 221 48 25 205 69 7 505 0 0 526 0 0 289 52 ]
T [ 127 101 104 124 128 91 179 85 6 13 0 0 0 34 0 78 187 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1228.1 MA1228 1 AT4G18450 Arabidopsis thaliana
AP2/ERF domain
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0265.1

ChIP-seq Centrality
log(P-value): -196.246

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0265.1

ChIP-seq Centrality
log(P-value): -212.825

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: