Detailed information of matrix profile MA1217.1

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Profile summary
Name: CBF2
Matrix ID: MA1217.1
Class: AP2/ERF domain
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 9952441
Uniprot ID: Q9SYS6  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 160 137 143 91 51 294 0 0 0 595 0 489 53 182 207 ]
C [ 173 202 115 170 223 0 582 595 0 0 595 24 46 190 91 ]
G [ 83 84 135 57 97 301 0 0 595 0 0 49 5 131 177 ]
T [ 179 172 202 277 224 0 13 0 0 0 0 33 491 92 120 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1217.1 MA1217 1 CBF2 Arabidopsis thaliana
AP2/ERF domain
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0314.1

ChIP-seq Centrality
log(P-value): -8662.71

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0314.1

ChIP-seq Centrality
log(P-value): -8711.44

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: