Detailed information of matrix profile MA1216.1

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Profile summary
Name: RAP21
Matrix ID: MA1216.1
Class: AP2/ERF domain
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 9756931
Uniprot ID: Q8LC30  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 113 114 186 36 23 432 0 0 0 380 1 391 161 ]
C [ 244 303 49 363 567 0 590 590 0 148 589 60 223 ]
G [ 74 63 184 76 0 158 0 0 590 1 0 85 33 ]
T [ 159 110 171 115 0 0 0 0 0 61 0 54 173 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1216.1 MA1216 1 RAP21 Arabidopsis thaliana
AP2/ERF domain
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0378.1

ChIP-seq Centrality
log(P-value): -2597.9

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0378.1

ChIP-seq Centrality
log(P-value): -2590.11

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: