Detailed information of matrix profile MA1197.1

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Profile summary
Name: CAMTA1
Matrix ID: MA1197.1
Class: Other
Family: CAMTA
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25215497
Uniprot ID: Q9FY74  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 301 430 405 172 0 0 0 0 0 63 235 237 ]
C [ 56 46 6 140 598 0 578 0 0 58 33 58 ]
G [ 117 45 132 285 0 598 0 598 3 326 156 170 ]
T [ 124 77 55 1 0 0 20 0 595 151 174 133 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1197.1 MA1197 1 CAMTA1 Arabidopsis thaliana
CAMTA Other
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0312.1

ChIP-seq Centrality
log(P-value): -5873.81

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0312.1

ChIP-seq Centrality
log(P-value): -5763.96

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: