Detailed information of matrix profile MA1194.1

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Profile summary
Name: AT3G10580
Matrix ID: MA1194.1
Class: Helix-Turn-Helix
Family: Myb-related
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25215497
Uniprot ID:
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 64 61 61 43 65 48 0 139 4 137 138 17 41 63 12 ]
C [ 14 2 4 14 12 5 0 1 0 0 0 6 37 0 22 ]
G [ 33 31 2 30 11 76 132 0 0 0 1 97 53 0 12 ]
T [ 29 46 73 53 52 11 8 0 136 3 1 20 9 77 94 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1194.1 MA1194 1 AT3G10580 Arabidopsis thaliana
Myb-related Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: