Detailed information of matrix profile MA1193.1

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Profile summary
Name: At2g38090
Matrix ID: MA1193.1
Class: Helix-Turn-Helix
Family: Myb-related
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25215497
Uniprot ID:
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 19 10 5 47 15 12 9 1 0 63 0 0 2 31 25 29 20 10 14 8 10 ]
C [ 24 18 24 7 3 24 40 0 1 1 0 64 42 0 13 0 18 21 12 8 11 ]
G [ 0 6 9 3 4 10 3 0 1 0 0 0 0 7 9 1 2 1 10 10 13 ]
T [ 21 30 26 7 42 18 12 63 62 0 64 0 20 26 17 34 24 32 28 38 30 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1193.1 MA1193 1 At2g38090 Arabidopsis thaliana
Myb-related Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: