Detailed information of matrix profile MA1191.1

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Profile summary
Name: AT3G10113
Matrix ID: MA1191.1
Class: Helix-Turn-Helix
Family: Myb-related
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25215497
Uniprot ID: F4J2J6  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 169 234 207 226 334 540 599 596 0 599 0 0 108 199 287 ]
C [ 143 129 147 120 54 1 0 0 0 0 0 599 78 103 103 ]
G [ 95 93 93 147 51 5 0 3 3 0 0 0 15 79 91 ]
T [ 192 143 152 106 160 53 0 0 596 0 599 0 398 218 118 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1191.1 MA1191 1 AT3G10113 Arabidopsis thaliana
Myb-related Helix-Turn-Helix
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0258.1

ChIP-seq Centrality
log(P-value): -53915.0

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0258.1

ChIP-seq Centrality
log(P-value): -54135.2

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: