Detailed information of matrix profile MA1188.1

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Profile summary
Name: At3g11280
Matrix ID: MA1188.1
Class: Helix-Turn-Helix
Family: Myb-related
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25215497
Uniprot ID:
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 361 260 29 117 0 4 582 0 0 120 122 189 290 112 ]
C [ 46 16 326 360 17 93 0 3 582 144 63 195 15 155 ]
G [ 60 28 34 64 0 0 0 6 0 22 52 51 28 30 ]
T [ 115 278 193 41 565 485 0 573 0 296 345 147 249 285 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1188.1 MA1188 1 At3g11280 Arabidopsis thaliana
Myb-related Helix-Turn-Helix
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0259.1

ChIP-seq Centrality
log(P-value): -1779.73

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0259.1

ChIP-seq Centrality
log(P-value): -1593.53

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: