Detailed information of matrix profile MA1184.1

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Profile summary
Name: RVE1
Matrix ID: MA1184.1
Class: Helix-Turn-Helix
Family: Myb-related
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25215497
Uniprot ID: F4KGY6  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 234 203 237 332 526 600 586 4 600 0 0 85 205 254 ]
C [ 117 147 124 42 0 0 5 0 0 0 600 42 103 130 ]
G [ 106 101 142 58 0 0 4 10 0 0 0 12 77 87 ]
T [ 143 149 97 168 74 0 5 586 0 600 0 461 215 129 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1184.1 MA1184 1 RVE1 Arabidopsis thaliana
Myb-related Helix-Turn-Helix
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0384.1

ChIP-seq Centrality
log(P-value): -51697.4

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0384.1

ChIP-seq Centrality
log(P-value): -52015.8

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: