Detailed information of matrix profile MA1183.1

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Profile summary
Name: At5g52660
Matrix ID: MA1183.1
Class: Helix-Turn-Helix
Family: Myb-related
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25215497
Uniprot ID: Q8H0W3  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 521 0 596 0 579 0 0 40 113 90 134 ]
C [ 2 0 0 0 1 2 0 0 36 109 91 ]
G [ 44 596 0 0 0 0 0 1 20 92 141 ]
T [ 29 0 0 596 16 594 596 555 427 305 230 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1183.1 MA1183 1 At5g52660 Arabidopsis thaliana
Myb-related Helix-Turn-Helix
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0279.1

ChIP-seq Centrality
log(P-value): -6480.35

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0279.1

ChIP-seq Centrality
log(P-value): -6632.36

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: