Detailed information of matrix profile MA1182.1

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Profile summary
Name: At3g09600
Matrix ID: MA1182.1
Class: Helix-Turn-Helix
Family: Myb-related
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25215497
Uniprot ID: Q8RWU3  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 490 0 593 0 590 0 0 50 115 132 167 145 ]
C [ 8 0 0 0 0 2 0 2 44 111 73 96 ]
G [ 38 593 0 0 0 0 0 0 35 92 133 123 ]
T [ 57 0 0 593 3 591 593 541 399 258 220 229 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1182.1 MA1182 1 At3g09600 Arabidopsis thaliana
Myb-related Helix-Turn-Helix
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0257.1

ChIP-seq Centrality
log(P-value): -23327.9

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0257.1

ChIP-seq Centrality
log(P-value): -24473.0

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: