Detailed information of matrix profile MA1177.1

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Profile summary
Name: MYB65
Matrix ID: MA1177.1
Class: Helix-Turn-Helix
Family: Myb
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25215497
Uniprot ID: Q9FR97  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 284 129 105 183 75 599 599 0 38 76 178 280 266 ]
C [ 61 250 218 121 75 0 0 599 354 0 153 219 57 ]
G [ 105 41 65 205 0 0 0 0 118 523 4 2 75 ]
T [ 149 179 211 90 449 0 0 0 89 0 264 98 201 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1177.1 MA1177 1 MYB65 Arabidopsis thaliana
Myb Helix-Turn-Helix
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0367.1

ChIP-seq Centrality
log(P-value): -2797.61

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0367.1

ChIP-seq Centrality
log(P-value): -2634.01

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: