Detailed information of matrix profile MA1176.1

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Profile summary
Name: MYB119
Matrix ID: MA1176.1
Class: Helix-Turn-Helix
Family: Myb
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25215497
Uniprot ID: Q9FIM4  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 91 72 21 597 598 0 0 0 229 96 248 ]
C [ 155 7 1 0 0 598 68 33 117 188 78 ]
G [ 36 506 0 1 0 0 514 392 0 27 179 ]
T [ 316 13 576 0 0 0 16 173 252 287 93 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1176.1 MA1176 1 MYB119 Arabidopsis thaliana
Myb Helix-Turn-Helix
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0359.1

ChIP-seq Centrality
log(P-value): -12450.7

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0359.1

ChIP-seq Centrality
log(P-value): -10653.1

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: