Detailed information of matrix profile MA1175.1

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Profile summary
Name: MYB81
Matrix ID: MA1175.1
Class: Helix-Turn-Helix
Family: Myb
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25215497
Uniprot ID: Q9SLH1  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 149 30 600 600 0 118 94 268 264 124 113 ]
C [ 163 99 0 0 600 234 0 102 95 59 180 ]
G [ 223 0 0 0 0 114 506 0 1 7 39 ]
T [ 65 471 0 0 0 134 0 230 240 410 268 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1175.1 MA1175 1 MYB81 Arabidopsis thaliana
Myb Helix-Turn-Helix
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0371.1

ChIP-seq Centrality
log(P-value): -2590.64

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0371.1

ChIP-seq Centrality
log(P-value): -2511.85

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: