Detailed information of matrix profile MA1174.1

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Profile summary
Name: MYB56
Matrix ID: MA1174.1
Class: Helix-Turn-Helix
Family: Myb
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25215497
Uniprot ID: Q6R053  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 236 169 265 270 333 1 600 600 0 26 143 223 237 194 133 ]
C [ 49 73 106 80 91 3 0 0 600 35 0 41 143 58 135 ]
G [ 114 78 71 103 45 0 0 0 0 417 457 2 13 25 37 ]
T [ 201 280 158 147 131 596 0 0 0 122 0 334 207 323 295 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1174.1 MA1174 1 MYB56 Arabidopsis thaliana
Myb Helix-Turn-Helix
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0365.1

ChIP-seq Centrality
log(P-value): -1558.67

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0365.1

ChIP-seq Centrality
log(P-value): -1518.6

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: