Detailed information of matrix profile MA1173.1

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Profile summary
Name: MYB101
Matrix ID: MA1173.1
Class: Helix-Turn-Helix
Family: Myb
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25215497
Uniprot ID: O80883  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 327 369 198 140 180 160 596 598 0 54 86 367 407 206 139 ]
C [ 82 53 249 261 120 51 2 0 600 424 4 43 72 112 181 ]
G [ 86 70 47 44 188 47 1 2 0 49 510 27 2 22 68 ]
T [ 105 108 106 155 112 342 1 0 0 73 0 163 119 260 212 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1173.1 MA1173 1 MYB101 Arabidopsis thaliana
Myb Helix-Turn-Helix
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0358.1

ChIP-seq Centrality
log(P-value): -251.914

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0358.1

ChIP-seq Centrality
log(P-value): -222.994

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: