Detailed information of matrix profile MA1172.1

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Profile summary
Name: MYB3R5
Matrix ID: MA1172.1
Class: Helix-Turn-Helix
Family: Myb
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25215497
Uniprot ID: Q6R032  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 258 306 339 312 203 199 41 196 389 20 0 0 0 4 238 ]
C [ 77 65 21 22 56 79 59 0 4 546 566 0 2 0 0 ]
G [ 97 65 48 19 40 127 50 224 154 0 0 566 0 0 291 ]
T [ 134 130 158 213 267 161 416 146 19 0 0 0 564 562 37 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1172.1 MA1172 1 MYB3R5 Arabidopsis thaliana
Myb Helix-Turn-Helix
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0364.1

ChIP-seq Centrality
log(P-value): -7365.29

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0364.1

ChIP-seq Centrality
log(P-value): -7381.88

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: