Detailed information of matrix profile MA1170.1

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Profile summary
Name: MYB118
Matrix ID: MA1170.1
Class: Helix-Turn-Helix
Family: Myb
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25215497
Uniprot ID: Q9LVW4  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 100 108 50 6 0 277 278 0 2 0 75 23 118 86 96 80 69 ]
C [ 18 23 78 0 0 0 0 278 19 22 57 84 29 51 32 34 40 ]
G [ 22 24 5 270 0 0 0 0 251 178 0 7 80 34 33 35 34 ]
T [ 138 123 145 2 278 1 0 0 6 78 146 164 51 107 117 129 135 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1170.1 MA1170 1 MYB118 Arabidopsis thaliana
Myb Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: