Detailed information of matrix profile MA1166.1

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Profile summary
Name: AT3G12730
Matrix ID: MA1166.1
Class: Other
Family: G2like
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25215497
Uniprot ID: Q8VYI2  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 40 19 102 105 0 104 0 5 0 0 2 5 17 14 ]
C [ 14 0 0 0 0 1 0 1 101 53 44 17 12 23 ]
G [ 44 86 0 0 22 0 0 0 0 10 16 3 9 14 ]
T [ 7 0 3 0 83 0 105 99 4 42 43 80 67 54 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1166.1 MA1166 1 AT3G12730 Arabidopsis thaliana
G2like Other
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: