Detailed information of matrix profile MA1162.1

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Profile summary
Name: TCX2
Matrix ID: MA1162.1
Class: Other
Family: CPP
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25215497
Uniprot ID: F4JIF5  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 257 135 60 54 292 559 554 514 10 0 0 435 599 599 178 ]
C [ 49 23 41 173 132 6 14 0 1 0 318 1 0 0 93 ]
G [ 61 28 1 41 107 26 1 14 7 0 0 163 0 0 10 ]
T [ 232 413 497 331 68 8 30 71 581 599 281 0 0 0 318 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1162.1 MA1162 1 TCX2 Arabidopsis thaliana
CPP Other
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0399.1

ChIP-seq Centrality
log(P-value): -5748.96

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0399.1

ChIP-seq Centrality
log(P-value): -5458.89

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: