Detailed information of matrix profile MA1161.1

  1. Home
  2. Matrix > MA1161.1

Profile summary
Name: TSO1
Matrix ID: MA1161.1
Class: Other
Family: CPP
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25215497
Uniprot ID: Q9LUI3  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 136 97 71 54 86 160 228 232 244 0 0 0 214 264 264 ]
C [ 15 9 11 6 38 26 0 1 0 8 0 69 0 0 0 ]
G [ 28 28 8 9 15 41 35 16 0 3 0 0 45 0 0 ]
T [ 85 130 174 195 125 37 1 15 20 253 264 195 5 0 0 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1161.1 MA1161 1 TSO1 Arabidopsis thaliana
CPP Other
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: