Detailed information of matrix profile MA1158.1

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Profile summary
Name: MGP
Matrix ID: MA1158.1
Class: C2H2
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 24039602
Uniprot ID: Q9ZWA6  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 187 363 143 402 512 421 552 153 0 593 0 578 587 566 484 319 285 269 257 263 ]
C [ 203 50 183 15 0 26 21 379 0 0 594 0 3 9 28 80 77 72 80 68 ]
G [ 50 139 185 50 2 73 20 52 594 1 0 16 4 16 19 56 68 112 94 104 ]
T [ 154 42 83 127 80 74 1 10 0 0 0 0 0 3 63 139 164 141 163 159 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1158.1 MA1158 1 MGP Arabidopsis thaliana
C2H2
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: