Detailed information of matrix profile MA1068.1

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Profile summary
Name: TGA2
Matrix ID: MA1068.1
Class: Basic leucine zipper factors (bZIP)
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: PBM
Validation: 10662863
Uniprot ID: P43273  
Source:
Comment: Data is from PMID:24477691

Sequence logo

Frequency matrix

         
A [ 961 1 24 6 27 989 2 78 ]
C [ 1 980 2 5 970 2 110 704 ]
G [ 24 3 974 1 2 7 380 161 ]
T [ 13 16 1 988 1 3 508 58 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1068.1 MA1068 1 TGA2 Arabidopsis thaliana
Basic leucine zipper factors (bZIP)
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0402.1

ChIP-seq Centrality
log(P-value): -6289.55

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0402.1

ChIP-seq Centrality
log(P-value): -6688.75

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: