Detailed information of matrix profile MA1019.1

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Profile summary
Name: Glyma19g26560.1
Matrix ID: MA1019.1
Class: Basic helix-loop-helix factors (bHLH)
Family: TCP domain
Collection: CORE
Taxon: Plants
Species: Glycine max
Data Type: PBM
Validation: 21241251
Uniprot ID: I1N7U7  
Source: 25215497
Comment: Data is from PMID:25215497

Sequence logo

Frequency matrix

         
A [ 89 11 20 0 49 144 33 59 218 ]
C [ 50 76 0 1 27 440 861 908 480 ]
G [ 844 17 976 996 882 307 19 14 199 ]
T [ 17 896 4 3 42 109 86 19 104 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1019.1 MA1019 1 Glyma19g26560.1 Glycine max
TCP domain Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: