Detailed information of matrix profile MA0580.1

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Profile summary
Name: DYT1
Matrix ID: MA0580.1
Class: Basic helix-loop-helix factors (bHLH)
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: SELEX
Validation: 22775442
Uniprot ID: O81900  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 4 3 1 2 10 3 4 0 11 0 1 0 0 11 ]
C [ 6 1 2 2 1 0 0 11 0 11 0 0 0 0 ]
G [ 0 7 1 6 0 7 0 0 0 0 10 0 11 0 ]
T [ 1 0 7 1 0 1 7 0 0 0 0 11 0 0 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0580.1 MA0580 1 DYT1 Arabidopsis thaliana
Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: