Detailed information of matrix profile MA0579.1

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Profile summary
Name: CDC5
Matrix ID: MA0579.1
Class: Tryptophan cluster factors
Family: Myb/SANT domain factors
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: SELEX
Validation: 8917598
Uniprot ID: P92948  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 28 17 0 2 6 91 2 2 4 2 18 ]
C [ 24 26 92 2 85 2 0 93 4 55 23 ]
G [ 32 55 4 0 0 2 93 5 91 27 45 ]
T [ 15 2 4 96 8 4 4 0 0 16 14 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0579.1 MA0579 1 CDC5 Arabidopsis thaliana
Myb/SANT domain factors Tryptophan cluster factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: