Detailed information of matrix profile MA0578.1

  1. Home
  2. Matrix > MA0578.1

Profile summary
Name: SPL8
Matrix ID: MA0578.1
Class: SBP-type zinc finger
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: SELEX
Validation: 16095614
Uniprot ID: Q8GXL3  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 11 11 9 10 10 3 0 0 30 0 6 10 5 13 10 11 ]
C [ 1 0 4 1 6 10 0 0 0 30 12 7 8 5 3 6 ]
G [ 4 6 6 4 4 2 30 0 0 0 1 0 1 0 0 0 ]
T [ 14 13 11 15 10 15 0 30 0 0 11 13 16 12 17 13 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0578.1 MA0578 1 SPL8 Arabidopsis thaliana
SBP-type zinc finger
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: