Detailed information of matrix profile MA0577.1

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Profile summary
Name: SPL3
Matrix ID: MA0577.1
Class: SBP-type zinc finger
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: SELEX
Validation: 16095614
Uniprot ID: P93015  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 13 8 14 10 13 2 0 0 34 0 10 13 8 10 12 9 ]
C [ 3 2 0 1 15 29 0 0 0 34 7 6 9 8 7 12 ]
G [ 9 8 6 13 1 2 34 0 0 0 7 2 4 2 0 3 ]
T [ 9 16 14 10 5 1 0 34 0 0 10 13 13 14 15 10 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0577.1 MA0577 1 SPL3 Arabidopsis thaliana
SBP-type zinc finger
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: