Detailed information of matrix profile MA0547.1

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Profile summary
Name: skn-1
Matrix ID: MA0547.1
Class: Basic leucine zipper factors (bZIP)
Family:
Collection: CORE
Taxon: Nematodes
Species: Caenorhabditis elegans
Data Type: ChIP-seq
Validation: 23555279
Uniprot ID: P34707  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 136 142 78 41 86 0 0 298 13 0 224 34 30 30 23 ]
C [ 53 21 0 28 22 0 318 0 5 301 26 16 55 39 62 ]
G [ 37 16 0 0 179 0 0 0 35 17 36 0 24 12 43 ]
T [ 92 139 240 249 31 318 0 20 265 0 32 268 209 237 190 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0547.1 MA0547 1 skn-1 Caenorhabditis elegans
Basic leucine zipper factors (bZIP)
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: