Detailed information of matrix profile MA0531.1

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Profile summary
Name: CTCF
Matrix ID: MA0531.1
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc finger factors
Collection: CORE
Taxon: Insects
Species: Drosophila melanogaster
Data Type: ChIP-chip
Validation: 17616980
Uniprot ID: Q9VS55  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 306 313 457 676 257 1534 202 987 2 0 2 124 1 79 231 ]
C [ 876 1147 383 784 714 1 0 0 4 0 0 1645 0 1514 773 ]
G [ 403 219 826 350 87 192 1700 912 311 1902 1652 3 1807 8 144 ]
T [ 317 223 236 92 844 175 0 3 1585 0 248 130 94 301 754 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0531.1 MA0531 1 CTCF Drosophila melanogaster
More than 3 adjacent zinc finger factors C2H2 zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: