Detailed information of matrix profile MA0513.1

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Profile summary
Name: SMAD2::SMAD3::SMAD4
Matrix ID: MA0513.1
Class: SMAD/NF-1 DNA-binding domain factors::SMAD/NF-1 DNA-binding domain factors::SMAD/NF-1 DNA-binding domain factors
Family: SMAD factors::SMAD factors::SMAD factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 9741623
Uniprot ID: P84022   Q13485   Q15796  
Source: PAZAR
Comment:

Sequence logo

Frequency matrix

         
A [ 166 196 14 33 0 0 106 211 0 765 30 117 110 ]
C [ 432 75 8 45 899 0 231 125 896 19 736 583 214 ]
G [ 168 34 877 103 0 0 539 280 3 18 133 47 35 ]
T [ 133 594 0 718 0 899 23 283 0 97 0 152 540 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0513.1 MA0513 1 SMAD2::SMAD3::SMAD4 Homo sapiens
SMAD factors::SMAD factors::SMAD factors SMAD/NF-1 DNA-binding domain factors::SMAD/NF-1 DNA-binding domain factors::SMAD/NF-1 DNA-binding domain factors
     

log(P-value) = -460

TFFM details

TFFM ID: TFFM0201.1

ChIP-seq Centrality
log(P-value): -969.093

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0201.1

ChIP-seq Centrality
log(P-value): -964.027

TFFM detailed summary logos

Description: -

Alias: -

Symbol: -

Consensus:

Included Models:

GC Content: