Detailed information of matrix profile MA0511.2

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Profile summary
Name: RUNX2
Matrix ID: MA0511.2
Class: Runt domain factors
Family: Runt-related factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 20483917
Uniprot ID: Q13950  
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

         
A [ 3872 6621 6621 0 0 1914 0 6621 4202 ]
C [ 1092 556 325 6621 6621 36 6621 476 677 ]
G [ 326 1215 0 0 0 4707 0 458 1134 ]
T [ 2748 582 0 0 0 120 0 191 607 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0511.1 MA0511 1 RUNX2 Homo sapiens
Runt-related factors Runt domain factors
MA0511.2 MA0511 2 RUNX2 Homo sapiens
Runt-related factors Runt domain factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0092.1

ChIP-seq Centrality
log(P-value): -370.881

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0092.1

ChIP-seq Centrality
log(P-value): -378.24

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: