Detailed information of matrix profile MA0474.2

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Profile summary
Name: ERG
Matrix ID: MA0474.2
Class: Tryptophan cluster factors
Family: Ets-related factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 20517297
Uniprot ID: P11308  
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

         
A [ 792 4566 28 1245 7 29 0 6 97 928 ]
C [ 1668 355 2576 7 0 4566 4566 22 398 848 ]
G [ 1100 1586 100 119 20 1 0 4566 4566 268 ]
T [ 1006 137 1990 4566 4566 0 1 635 646 4566 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0474.1 MA0474 1 Erg Mus musculus
Ets-related factors Tryptophan cluster factors
MA0474.2 MA0474 2 ERG Homo sapiens
Ets-related factors Tryptophan cluster factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0025.1

ChIP-seq Centrality
log(P-value): -7789.77

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0025.1

ChIP-seq Centrality
log(P-value): -7499.26

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: