Detailed information of matrix profile MA0258.2

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Profile summary
Name: ESR2
Matrix ID: MA0258.2
Class: Nuclear receptors with C4 zinc fingers
Family: Steroid hormone receptors (NR3)
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 18272478
Uniprot ID: Q92731  
Source: PAZAR
Comment:

Sequence logo

Frequency matrix

         
A [ 5410 429 59 74 0 8098 502 2092 1808 1602 1121 3278 434 1111 834 ]
C [ 96 0 0 147 7621 1 4202 3235 2510 975 398 2056 6469 5854 2708 ]
G [ 2563 7170 8143 989 533 57 2738 1688 2173 533 6658 1391 363 0 606 ]
T [ 174 644 41 7033 89 87 801 1228 1752 5133 66 1518 977 1278 4095 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0258.1 MA0258 1 ESR2 Homo sapiens
Steroid hormone receptors (NR3) Nuclear receptors with C4 zinc fingers
MA0258.2 MA0258 2 ESR2 Homo sapiens
Steroid hormone receptors (NR3) Nuclear receptors with C4 zinc fingers
     

log(P-value) = -7941

TFFM details

TFFM ID: TFFM0027.1

ChIP-seq Centrality
log(P-value): -8210.7

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0027.1

ChIP-seq Centrality
log(P-value): -8244.84

TFFM detailed summary logos

Description: estrogen receptor 2 (ER beta)

Alias: NR3A2,Erb

Symbol: ESR2

Consensus:

Included Models:

GC Content: