Detailed information of matrix profile MA0132.1

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Profile summary
Name: Pdx1
Matrix ID: MA0132.1
Class: Homeo domain factors
Family: HOX-related factors
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: SELEX
Validation: 14704343
Uniprot ID: P52946  
Source:
Comment: -

Sequence logo

Frequency matrix

         
A [ 1 0 31 31 0 1 ]
C [ 19 0 0 0 0 1 ]
G [ 5 0 0 0 1 10 ]
T [ 6 31 0 0 30 19 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0132.1 MA0132 1 Pdx1 Mus musculus
HOX-related factors Homeo domain factors
MA0132.2 MA0132 2 PDX1 Homo sapiens
HOX-related factors Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description: pancreatic and duodenal homeobox 1

Alias: IDX-1,STF-1,PDX-1,MODY4

Symbol: PDX1

Consensus:

Included Models:

GC Content: