Detailed information of matrix profile MA0065.2

Profile summary

Name: Pparg::Rxra
Matrix ID: MA0065.2
Class: Nuclear receptors with C4 zinc fingers::Nuclear receptors with C4 zinc fingers
Family: Thyroid hormone receptor-related factors (NR1)::RXR-related receptors (NR2)
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: ChIP-seq
Validation: 18981474
Uniprot ID: P28700   P37238  
Source:
Comment: Heterodimer between PPARG and RXRA

Sequence logo

Frequency matrix

A [ 81 109 479 120 12 9 23 8 66 193 34 87 79 464 126 ]
C [ 47 144 263 693 767 137 270 15 179 395 674 671 368 127 320 ]
G [ 320 127 368 671 674 395 179 15 270 137 767 693 263 144 47 ]
T [ 126 464 79 87 34 193 66 8 23 9 12 120 479 109 81 ]

Binding sites information

External links