Detailed information of matrix profile MA0039.2

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Profile summary
Name: Klf4
Matrix ID: MA0039.2
Class: C2H2 zinc finger factors
Family: Three-zinc finger Kruppel-related factors
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: ChIP-seq
Validation: 18555785
Uniprot ID: Q60793  
Source:
Comment: -

Sequence logo

Frequency matrix

         
A [ 932 289 125 2042 34 2139 16 13 6 1765 ]
C [ 280 3789 3902 2179 4273 11 4281 4304 4237 1022 ]
G [ 2858 130 46 80 15 1922 36 13 9 81 ]
T [ 254 123 264 42 22 277 14 14 88 1468 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0039.1 MA0039 1 Klf4 Mus musculus
Three-zinc finger Kruppel-related factors C2H2 zinc finger factors
MA0039.2 MA0039 2 Klf4 Mus musculus
Three-zinc finger Kruppel-related factors C2H2 zinc finger factors
MA0039.3 MA0039 3 KLF4 Homo sapiens
Three-zinc finger Kruppel-related factors C2H2 zinc finger factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0056.1

ChIP-seq Centrality
log(P-value): -3451.72

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0056.1

ChIP-seq Centrality
log(P-value): -3445.53

TFFM detailed summary logos

Description: Krüppel-like factor 4 (gut)

Alias: EZF,GKLF

Symbol: KLF4

Consensus:

Included Models:

GC Content: