Detailed information of matrix profile MA0038.1

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Profile summary
Name: Gfi1
Matrix ID: MA0038.1
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc finger factors
Collection: CORE
Taxon: Vertebrates
Species: Rattus norvegicus
Data Type: SELEX
Validation: 8754800
Uniprot ID: Q07120  
Source:
Comment: -

Sequence logo

Frequency matrix

         
A [ 9 28 53 53 1 1 31 8 19 7 ]
C [ 20 16 0 0 0 52 7 28 11 13 ]
G [ 9 7 0 0 1 0 2 11 2 28 ]
T [ 15 2 0 0 51 0 13 6 21 5 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0038.1 MA0038 1 Gfi1 Rattus norvegicus
More than 3 adjacent zinc finger factors C2H2 zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description: growth factor independent 1 transcription repressor ZNF163

Alias: GFI1A,GFI-1

Symbol: GFI1

Consensus:

Included Models:

GC Content: