Detailed information of matrix profile MA0028.2

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Profile summary
Name: ELK1
Matrix ID: MA0028.2
Class: Tryptophan cluster factors
Family: Ets-related factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 1425594
Uniprot ID: P19419  
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

         
A [ 45807 1217 359 0 4 45807 45807 3016 916 13274 ]
C [ 2750 45807 45807 21 41 233 333 2361 6309 6673 ]
G [ 12959 1478 59 45807 45807 62 60 45807 1123 17273 ]
T [ 5718 236 21 26 713 25 2165 294 45807 8587 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0028.1 MA0028 1 ELK1 Homo sapiens
Ets-related factors Tryptophan cluster factors
MA0028.2 MA0028 2 ELK1 Homo sapiens
Ets-related factors Tryptophan cluster factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0023.1

ChIP-seq Centrality
log(P-value): -1805.85

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0023.1

ChIP-seq Centrality
log(P-value): -1804.08

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: