JASPAR CORE

Total 1564 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA0682.1 Pitx1 Mus musculus Homeo domain factors Paired-related HD factors
MA0683.1 POU4F2 Homo sapiens Homeo domain factors POU domain factors
MA0684.1 RUNX3 Homo sapiens Runt domain factors Runt-related factors
MA0685.1 SP4 Homo sapiens C2H2 zinc finger factors Three-zinc finger Krüppel-related factors
MA0686.1 SPDEF Homo sapiens Tryptophan cluster factors Ets-related factors
MA0687.1 SPIC Homo sapiens Tryptophan cluster factors Ets-related factors
MA0688.1 TBX2 Homo sapiens T-Box factors TBX2-related factors
MA0689.1 TBX20 Homo sapiens T-Box factors TBX1-related factors
MA0690.1 TBX21 Homo sapiens T-Box factors TBrain-related factors
MA0691.1 TFAP4 Homo sapiens Basic helix-loop-helix factors (bHLH) bHLH-ZIP factors
Showing 10 profiles of page 83 from 157 pages

Analyze selected profiles

Please select matrix profiles on the left side to add to your cart or perform the following analysis.


You have 0 profile(s) in your cart. You can add profiles to the cart to download or perform analysis.

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)

Relative profile score threshold %

Cluster selected models using STAMP tool.




You can use the Newick tree from results to visualize on PhyloTree

Create random matrix models based on selected models.


Create models with permuted columns from selected models.


Download the PFMs of the model(s) selected in four different formats.