JASPAR CORE

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Total 1564 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA0622.1 Mlxip Mus musculus Basic helix-loop-helix factors (bHLH) bHLH-ZIP factors
MA0623.1 Neurog1 Mus musculus Basic helix-loop-helix factors (bHLH) Tal-related factors
MA0624.1 NFATC1 Meleagris gallopavo Rel homology region (RHR) factors NFAT-related factors
MA0625.1 NFATC3 Homo sapiens Rel homology region (RHR) factors NFAT-related factors
MA0626.1 Npas2 Mus musculus Basic helix-loop-helix factors (bHLH) PAS domain factors
MA0627.1 Pou2f3 Mus musculus Homeo domain factors POU domain factors
MA0628.1 POU6F1 Homo sapiens Homeo domain factors POU domain factors
MA0629.1 Rhox11 Mus musculus Homeo domain factors Paired-related HD factors
MA0630.1 SHOX Homo sapiens Homeo domain factors Paired-related HD factors
MA0631.1 Six3 Mus musculus Homeo domain factors HD-SINE factors
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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

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Cluster

Cluster selected models using STAMP tool.



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Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.